Okay, this is it, finally complete. I'd suggest that you not download the zip unless you've seen the whole show, as the "Who Killed...?" question is inherently a spoiler. However, the game is playable without spoilers, so if you have friends who haven't seen the whole thing yet, they can play too, as long as you don't use the spoiler version of the logo (The directions in the zip explain it better). Anyway, the Zip file contains literally everything you need to play the game*, just print out each image as "landscape" and "fit to page," to print them as large as possible but all at the same scale. I'd recommend you print them right onto cardstock or thicker, and perhaps back the cards with construction paper and back the board with cardboard.
The board was made almost entirely from scratch in photoshop. Misato's Room, the Theatre, and the Elevator all borrow textures from the show, and the bits of city at the top are from a screenshot, but everything else is the result of inventive use of photoshop effects. A real clue board was used as reference, but there's no trace of it in the final image.
If anyone actually decides to play this, let me know how it goes! I've played it, and it is fun.
-Game Board (in four peices)
-Case File folder
-Alternate Logo with Spoiler
-Eva Clue Die
(I moved the original to scraps and uploaded this one, because I had to edit that one so many times before creating the final zip)